Biostar LncRNA

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680

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recount RNAseq gencode lncRNA gene annotation

updated 3.2 years ago by chris.wilks ▴ 40 • written 3.3 years ago by francesco.gandolfi ▴ 20

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896

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GenomicFeatures TPM FPKM lncRNA

4.1 years ago Ina Hoeschele ▴ 620

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1.7k

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lncRNA featureCounts STAR annotation

updated 4.1 years ago by Wei Shi ★ 3.4k • written 4.1 years ago by inah ▴ 10

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767

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microarray lncrna microrna mrna raw data

updated 4.6 years ago by Axel Klenk ▴ 990 • written 4.6 years ago by ntagaras • 0

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2.5k

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arraystar lncRNA annotation annotationdbi

updated 6.8 years ago by xiangy7 • 0 • written 7.3 years ago by Kevin Coombes ▴ 430

5 results • Page 1 of 1

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Comment: why org.Hs.egGO2ALLEGS contain genes number difference from GO database? by pengmin.wang.1 • 0

yes, I also find genes in org.Bt.egGO2ALLEGS (bovine) are always less than online GO database in the same term. So do you know how to get t…

Comment: how to get gene list for given GO terms? by pengmin.wang.1 • 0

Hi, do you know how to get the gene list that have annotations from online GO database. For example, y <- as.list(org.Bt.egGO2ALLEGS), y co…

Comment: RSEM - tximport; where is effective_length information used? Implications for sc by Kelen • 0

Thank you. Gene-level analysis. I don't yet have a specific downstream pipeline in mind - I am trying to understand what limitations I migh…

Comment: FeaturePlot in scater by Guandong Shang ▴ 20

Thanks, this is what I want!

Comment: Using Age or other numerical variable to model expression in deseq2 by James W. MacDonald 60k

If you converted to a factor, the intercept is the reference level (you have to look at `levels(age)` to know what the reference is). If yo…

Votes

A: paired and unpaired test at the same time with voom limma

Comment: Duplicate correlation with limma in before-after exposure experiment

Answer: Using Age or other numerical variable to model expression in deseq2

Comment: Using Age or other numerical variable to model expression in deseq2

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