Biostar LncRNA

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arraystar lncRNA annotation annotationdbi

updated 6.9 years ago by xiangy7 • 0 • written 7.3 years ago by Kevin Coombes ▴ 430

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1.7k

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lncRNA featureCounts STAR annotation

updated 4.1 years ago by Wei Shi ★ 3.4k • written 4.1 years ago by inah ▴ 10

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899

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GenomicFeatures TPM FPKM lncRNA

4.1 years ago Ina Hoeschele ▴ 620

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768

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microarray lncrna microrna mrna raw data

updated 4.6 years ago by Axel Klenk ▴ 990 • written 4.6 years ago by ntagaras • 0

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682

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recount RNAseq gencode lncRNA gene annotation

updated 3.2 years ago by chris.wilks ▴ 40 • written 3.3 years ago by francesco.gandolfi ▴ 20

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Comment: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

That's a problem related to your lack of R basics, neither DESeq2 or Bioconductor software/technical problem. Please learn R basics first. …

Comment: How to get DESeq2 results for a list of genes by Lucía ▴ 10

Hi, thank you! Unfortunately that doesn't work. The first option gives me this error: ``` # Extracting for list my_genes <- read.delim("di…

Comment: Error by ATpoint ★ 1.3k

https://github.com/conda-forge/rpy2-feedstock/issues/1

Comment: Error: BiocParallel errors by lxl13260684135 • 0

I came across the same problem, have you solved it?

Answer: How to get DESeq2 results for a list of genes by ATpoint ★ 1.3k

Standard rules apply for filtering in R. If the genes are the rownames of the results object `res` then: res[my_ges,] or if the colu…

Votes

C: DESEQ2 'results' filter by value for multiple conditions (contrast off?)

How to get DESeq2 results for a list of genes

Answer: setting sizeFactors from scran :: caculateSumFactors.

Answer: ComplexHeatmap: Change font size of annotation axis values

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