updated 7.1 years ago by
Gordon Smyth
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written 7.1 years ago by
svlachavas
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Comment: Combine GRanges(List) to a single GRanges with unified breakpoints
by
Rodrigo
•
0
Hi @malcolm-cook-6293 ,
Thanks again for the help. The code got me started albeit, I changed a bit the handling of the metadata.
```
#'…
Comment: how to get the gene set from online GO database
by
pengmin.wang.1
•
0
thank you for your information. But I can't run this:
```{r}
hub <- AnnotationHub()
```
Error in UseMethod("filter_") :
no applicable me…
Comment: RSEM - tximport; where is effective_length information used? Implications for sc
by
Kelen
•
0
Perfect, thanks!
Comment: Confused about the CPM and TMM normalization in edgeR
by
Mohamed
•
0
Sorry for misunderstanding. What I meant was that there is always two option of using cpm on DGElist as shown in my above codes:
Option 1:…
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