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Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
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marka
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As a single dad in Australia, finding time to unwind is rare, but [Lincoln Casino][1] has become my go-to escape after putting the kids to …
Comment: DESeq2 output used for PCA plot on R studio
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swbarnes2
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You didn't generate it with an experiment, you made it up:
Your PCA doesn't look like a good RNASeq experiment, because it's not.
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Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong.
Are you sure this step isn't misla…
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I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
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The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
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