Bioconductor Maketxdbfromucsc

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genomicfeatures maketxdbfromucsc refseq

updated 8.1 years ago by Hervé Pagès 16k • written 8.1 years ago by Sebastien Vigneau ▴ 10

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3.8k

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genomicfeatures R bioconductor maketxdbfromucsc

updated 5.6 years ago by Hervé Pagès 16k • written 5.6 years ago by alanchenslm • 0

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genomicfeatures makeTxDbFromUCSC

updated 8.9 years ago by Michael Lawrence ★ 11k • written 9.3 years ago by federico.comoglio ▴ 100

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2.3k

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genomicfeatures txdb maketxdbfromucsc maketxdbfrombiomart rtracklayer

updated 6.7 years ago by Michael Lawrence ★ 11k • written 6.8 years ago by james.dalgleish ▴ 30

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GenomicFeatures makeTxDbFromUCSC R

5.8 years ago DMA1 ▴ 10

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969

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genomicfeatures maketxdbfromucsc

6.7 years ago rbacher ▴ 20

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1.4k

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GenomicFeatures makeTxDbFromUCSC

updated 6.1 years ago by shepherl 4.0k • written 6.1 years ago by warrena • 0

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Comment: SingleR Label.Ont by Stepah • 0

[Aussie Play][1] cares about its Australian players by offering a safe and secure gaming experience where there is never a dull moment. The…

Comment: ensemblVEP deprecation and how to reproduce by Vincent J. Carey, Jr. 6.7k

What aspect of ensemblVEP are you looking for? The vignette https://bioconductor.org/packages/release/bioc/vignettes/VariantAnnotation/in…

Answer: Help with design matrix for RNA-seq data using edgeR by Gordon Smyth 51k

This forum is intended to help with software usage and syntax rather than to answer research questions, and your question is a definitely a…

Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

DESeq2 has a way of fixing the reference pseudo-sample used for normalization. In estimateSizeFactors man page, you will see an argument g…

Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k

Sorry - I requested this to be posted here, I will answer.

Votes

Answer: Help with design matrix for RNA-seq data using edgeR

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Scholar to James W. MacDonald 67k

Popular Question to Matthew Thornton ▴ 380