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Answer: Help with Error in DiffBind
by
Rory Stark
★
4.7k
In your case, with only two replicates in each sample group, you can not perform a default analysis using only `dba.analyze()`. I suggest t…
Comment: Help with Error in DiffBind
by
Rory Stark
★
4.7k
Looks like you should either delete the file
> /labs/PI/atacseq_output_03172023/bwa/merged_library/DISEASED_REP2.mLb.clN.sorted.bam.bai
…
Comment: How to getting synonymous SNPs from BiomaRt before timing out?
by
James W. MacDonald
62k
```
> options(timeout = 1e6)
> z <- getBM(snp_attributes, c("ensembl_gene","so_mini_parent_name"), list("ENSG00000138376", "synonymous_vari…
Comment: can negative value microarray matrix data analysed by limma directly
by
linouhao
▴
20
Your help has really solved my huge confusion. You can help me look at a specific data set. I find the ***result is very strange. The ad…
Comment: How to getting synonymous SNPs from BiomaRt before timing out?
by
Damien
•
0
Thank you for your response.
How can I request for biomaRt to retrieve only synonymous variants? It does not appear to be an option for fi…
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