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Comment: Annotated dendogram (tree) from tbl_graph
by
christian.dina
•
0
Thx,
actually I have started reading it and think at some point I'll get it. However,
I was looking for something that would not need me …
Comment: pathview: Warning: Failed to download KEGG xml/png files, hsa04110 skipped!
by
덕윤
•
0
Really appreciate your help :)
At last, I can fix my problem. I have learned to check my code.
Comment: how can I do gene differential analysis on data after vst
by
Gordon Smyth
47k
I advised you to use limma-trend, which you can look up in the limma User's Guide. You simply analyse the vst values as if they were from a…
Comment: how can I do gene differential analysis on data after vst
by
linouhao
▴
20
I'm so happy and surprised to get your professional reply.
library(limma)
library(edge)
counts <- read.csv("raw_counts.cs…
Comment: can negative value microarray matrix data analysed by limma directly
by
Gordon Smyth
47k
The discussion on research gate is not of much value.
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