Showing : mart • reset
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News: Ensembl release 84 is out!
ensembl mart release84 biomart ensembl release News
updated 8.0 years ago by ▴ 20 • written 8.1 years ago by ▴ 800
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retrieve vgnc gene name or vgnc gene symbol from Biomart after differential analysis
biomart mart getbm
updated 5.7 years ago by 65k • written 5.7 years ago by ▴ 20
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Error in martCheck(mart, c("ensembl", "ENSEMBL_MART_ENSEMBL")) : No dataset selected, please select a dataset first.
biomart mart ensembl
updated 4.1 years ago by 65k • written 4.1 years ago by • 0
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Accessing local installation of biomart results in "Unexpected format to the list of available marts"
mart martconfigurator biomaRt xml
updated 3.4 years ago by ★ 6.5k • written 3.4 years ago by • 0
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News: Ensembl 99 has been released and renaming of species
biomart ensembl e99 mart news News
4.3 years ago Thomas Maurel ▴ 800
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News: Ensembl 98 has been released and renaming of species
biomart ensembl e98 mart News
4.6 years ago Thomas Maurel ▴ 800
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News: Ensembl 100 has been released
biomart ensembl e100 mart news News
4.0 years ago Thomas Maurel ▴ 800
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News: Ensembl release 85 is out!
ensembl biomart release85 ensembl release mart News
7.8 years ago Thomas Maurel ▴ 800
8 results • Page 1 of 1
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Comment: DESeq filtering specific to contrasts by Michael Love 41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts by Carlin95 • 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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