Bioconductor Massspectrometry

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852

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DifferentialExpression MassSpectrometry

updated 13 months ago by afikolami • 0 • written 19 months ago by sfall.isup • 0

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631

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Proteomics SingleCell JobPosting MassSpectrometry

13 months ago Laurent Gatto 1.6k

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615

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pRoloc proteomics Spatial Proteomics MassSpectrometry

13 months ago Laurent Gatto 1.6k

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496

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Proteomics R Bioconductor MassSpectrometry

14 months ago info ▴ 10

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1.2k

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Proteomics limma MassSpectrometry

updated 12 months ago by Gordon Smyth 50k • written 2.8 years ago by barrypraveen • 0

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1.1k

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Metabolomics proteomics MassSpectrometry

3.3 years ago Oliver • 0

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1.1k

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MassSpectrometry Proteomics mzR

3.4 years ago Gilad • 0

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3.7k

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mass spectrometry massspectrometry

updated 5.9 years ago by Laurent Gatto 1.6k • written 5.9 years ago by hwu12 ▴ 10

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1.5k

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xcms massspectrometry metabolomics

updated 6.0 years ago by Johannes Rainer ★ 2.0k • written 6.0 years ago by johnhamre3 • 0

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1.6k

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proteomics massspectrometry msstats

updated 6.1 years ago by Laurent Gatto 1.6k • written 6.1 years ago by zz298 • 0

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2.1k

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impute missing value imputation DEP massspectrometry

updated 6.4 years ago by Laurent Gatto 1.6k • written 6.4 years ago by serpalma.v ▴ 60

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2.5k

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xcms metabolomics massspectrometry lipidomics bioconductor

8.3 years ago Titan • 0

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2.1k

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xcms metabolomics lipidomics proteomics massspectrometry

8.3 years ago Titan • 0

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1.5k

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proteomics news course massspectrometry News

9.1 years ago Olga Vitek ▴ 40

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1.3k

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proteomics massspectrometry Job

9.2 years ago Laurent Gatto 1.6k

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6.8k

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limma voom proteomics spectral counts massspectrometry

updated 9.2 years ago by Gordon Smyth 50k • written 9.2 years ago by Ben Neely ▴ 40

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1.7k

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proteomics massspectrometry R News

9.2 years ago vitek.olga ▴ 20

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1.4k

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massspectrometry

updated 9.4 years ago by Laurent Gatto 1.6k • written 9.4 years ago by Roopa Subbaiaih ▴ 130

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2.3k

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massspectrometry

9.5 years ago meilan23 • 0

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1.6k

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MassSpectrometry PRIDE

updated 9.5 years ago by Laurent Gatto 1.6k • written 9.5 years ago by paulamirini2008 • 0

20 results • Page 1 of 1

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Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs by Guangchuang Yu ★ 1.2k

an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…

Comment: Different Shrunk Log2FC according with reference by andrebolerbarros ▴ 20

Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by ATpoint ★ 4.0k

The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…

Answer: Different Shrunk Log2FC according with reference by ATpoint ★ 4.0k

Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…

Votes

C: SGSeq: moving toward diffex from SGSeq analysis

DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds

Subset DEXSeqDataSet In DEXSeq

How to get all possible comparisons in DiffBind

Comment: get BM error

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Scholar to ATpoint ★ 4.0k