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Comment: DiffBind getting Fold values of near 0
by
ATpoint
★ 3.6k
Almost certainly data are noisy and DESeq2 (which is used internally) shrinks the fold changes towards zero, because the naive fold changes…
Comment: metagenomeSeq 1.16.0: unique features give NA's for logFC / p-val?
by
liqiong464
• 0
Hey, I encountered similiar problems now as handibles metentioned. But it seems a bit different somehow. I have 51 samples divided…
Comment: bam or VCF files from GSE75010
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3
• 0
Because it is so clever and unique, I believe that many more ideas will be inspired by and borrowed from your original concept. [five night…
Comment: How does Deseq2 deal with the row with zero when calculating size factors
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3
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Thank you for sharing. I've read a great deal on relevant topics! Unlike other articles, yours really made an impression on me. I hope you'…
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
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3
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Wonderful blog. It was wonderful to read your writings. This was a pretty fun read for me. I've bookmarked it and can't wait to read more f…
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Comment: Ensembl down???
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
Comment: Ensembl down???
Answer: SingleR annotation of several slots/patients
Answer: List of Deprecated Packages for Bioc3.18
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