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Comment: DispEsts plot
by
Sep
•
0
The sample size is 50 for each group, (50 pre and 50 post), samples are paired.
No. I have not included the factors to account for unwanted…
Comment: KEGG enrichment in R and gene IDs
by
Guido Hooiveld
★
3.6k
Do: `BiocManager::install(version = "3.16")`.
The packages are (apparently) up-to-date within Bioconductor version 3.15...
Comment: KEGG enrichment in R and gene IDs
by
Laia
▴
10
Wow thanks.
> tools:::.BioC_version_associated_with_R_version()
[1] '3.16'
> packageVersion("clusterProfiler")
[1] '4.4.4'
> packageVe…
Comment: KEGG enrichment in R and gene IDs
by
Guido Hooiveld
★
3.6k
No, having `NA` in your vector will work.
I did notice that I retrieved only a single `NA` (8th position), but you got 4. My Bioconductor …
Comment: DispEsts plot
by
Michael Love
39k
What are the sample size for the two groups? Have you included factors to account for unwanted variance?
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