Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
memory
•
reset
0
votes
0
replies
663
views
Running > 100 samples per group - memory issues
xcms
memory
findchrompeaks
3.0 years ago
abrsoule
▴ 30
1
vote
3
replies
1.3k
views
DEXSeq with large(ish) number of samples
DEXSeq
exon
memory
dispersions
estimateDispersions
4.0 years ago
andreismolnikov00
• 0
1
vote
9
replies
1.3k
views
Memory issues in summarizeOverlaps funtion
memory
summarizeOverlaps
updated 5.2 years ago by
James W. MacDonald
65k • written 5.2 years ago by
Diana
▴ 10
0
votes
0
replies
1.1k
views
'memory not mapped' error when running monocole
monocole
memory
CellDataSet
7.0 years ago
Assa Yeroslaviz
★ 1.5k
4 results • Page
1 of 1
Recent ...
Replies
Answer: OrgDb for maize
by
James W. MacDonald
65k
``` > library(AnnotationHub) > hub <- AnnotationHub() |===========================| 100% snapshotDate(): 2023-10-23 > query(hu…
Comment: Which input file is used for DGEList in EgdeR?
by
i.atanasoai
• 0
Understood, Thank you very much for the reply, very kind.
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?" No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences. It…
Votes
Install/Switch between multiple versions of R, Rstudio, and Bioconductor
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Awards
• All
Popular Question
to
shepherl
3.8k
Popular Question
to
BioinfGuru
▴ 30
Popular Question
to
Gordon Smyth
50k
Scholar
to
Peter Hickey
▴ 740
Popular Question
to
sropri
• 0
Locations
• All
United States,
just now
Ireland,
1 minute ago
United States,
1 minute ago
Netherlands,
2 minutes ago
Germany,
9 minutes ago
Traffic: 869 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6