Showing : merge • reset
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Merging paired end Illumina reads in R
merge
updated 4 months ago by ▴ 20 • written 6.7 years ago by ▴ 10
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4
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Merging multiple single cell experiment objects from different samples
sce SingleCellExperiment merge
4 weeks ago • updated 29 days ago achoppe • 0
2 results • Page 1 of 1
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Answer: edgeR : results from goana and kegga functions show opposite sig. p-value by James W. MacDonald 59k
It is not a valid assumption that a GO term and a KEGG term that appear to be the same are actually the same. ``` > library(org.Hs.eg.d…
Comment: help please！ by shepherl 3.1k
what is the result of `.libPaths()` and `"AnnotationDbi" %in% rownames(installed.packages())`
Comment: DEXSeq: samples$sample_id %in% colnames(counts) is not TRUE by jeroen.gilis ▴ 30
Hi phoebe1354, Sorry for the late reply, will try to follow it up now (if still relevant). Could you just give me `head(rownames(cts))` an…
Comment: DiffBind always reverts to default normalization by bers.anthrope • 0
Thanks a lot, everything works now!
Comment: Is it necessary to standardize Combat in R? by takemoto • 0
Thank you very much!
Votes
Answer: GDCprepare of RNAseq counts produces error
A: Expected counts from RSEM in DESeq2
A: Expected counts from RSEM in DESeq2
Answer: DiffBind always reverts to default normalization
Answer: DiffBind always reverts to default normalization
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