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Comment: DEXSeq: samples$sample_id %in% colnames(counts) is not TRUE by jeroen.gilis ▴ 30

Hi phoebe1354, Sorry for the late reply, will try to follow it up now (if still relevant). Could you just give me `head(rownames(cts))` an…

Comment: DiffBind always reverts to default normalization by bers.anthrope • 0

Thanks a lot, everything works now!

Comment: Is it necessary to standardize Combat in R? by takemoto • 0

Thank you very much!

Comment: Error in h(simpleError(msg, call)) : when calling makeOrgPackagefromNCBI() by Lan Anh • 0

Hello, Sorry for the late answer, I called several packages after my error and I do not know how it worked after that. Thank you for the h…

Comment: LogFC values in edgeR - w/wo intercept by JK Kim • 0

Thanks, Dr. Smyth!

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Comment: LogFC values in edgeR - w/wo intercept

Answer: LogFC values in edgeR - w/wo intercept

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