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metabolomics
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12
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324
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VST transformation (DESeq2) for metabolomics data
vst
Metabolomics
DESeq2
25 days ago • updated 17 days ago
Joan Miró
• 0
0
votes
1
reply
108
views
ROC plot for OPLS-DA
Metabolomics
updated 28 days ago by
etienne.thevenot
▴ 20 • written 5 weeks ago by
Eddie
• 0
0
votes
3
replies
246
views
OPLS-DA: values of pR2Y and pR2Q
Metabolomics
updated 29 days ago by
etienne.thevenot
▴ 20 • written 9 weeks ago by
Eddie
• 0
0
votes
1
reply
122
views
OPLS-DA permutation test
Metabolomics
updated 29 days ago by
etienne.thevenot
▴ 20 • written 4 weeks ago by
Eddie
• 0
0
votes
1
reply
136
views
OPLS-DA for paired samples
Metabolomics
updated 29 days ago by
etienne.thevenot
▴ 20 • written 9 weeks ago by
Eddie
• 0
0
votes
2
replies
173
views
variableMetadata for metabolites dataset
Metabolomics
updated 29 days ago by
Etienne
• 0 • written 12 weeks ago by
Eddie
• 0
0
votes
0
replies
67
views
Job:
Director of Metabolomics, University of Illinois Urbana-Champaign
Metabolomics
6 weeks ago
Jenny Drnevich
★ 2.0k
0
votes
1
reply
133
views
Permutation test for OPLS-DA
Metabolomics
updated 29 days ago by
etienne.thevenot
▴ 20 • written 10 weeks ago by
Eddie
• 0
0
votes
1
reply
260
views
OPLS package with @subsetVi = numeric(0)
metabolomicsWorkbenchR
PLS
OPLS
Metabolomics
ropls
updated 9 months ago by
etienne.thevenot
▴ 20 • written 9 months ago by
Fernando
• 0
1
vote
0
replies
396
views
Normalization of metabolomics/lipidomics data for limma
Lipidomics
Metabolomics
limma
Normalization
10 months ago
pgugger
▴ 60
3
votes
2
replies
2.0k
views
limma for metabolite data
limma
metabolomics
limma paired analysis
updated 6 months ago by
Francisco
• 0 • written 5.1 years ago by
mahes.muniandy
• 0
11 results • Page
1 of 1
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Comment: Ensembl plants at annotationHub?
by
karenserrano
• 0
Hi Johannes, Could I request the same EnsDb creation for Medicago truncatula? Thank you very much, Karen
Answer: EnrichGO not working with db created from annotationhub
by
Guido Hooiveld
★ 3.2k
Did you notice the first message that was returned after you ran `enrichGO()`? Thus: `--> No gene can be mapped....` This basically means…
Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
by
ksong
• 0
Hello my friends, I have exactly the same issue. May I ask if you have already solve this problem? I have tried `library(BiocParallel) regi…
Comment: cellCounts() function floating point error
by
Wei Shi
★ 3.3k
Yes we are currently working on generating a small example for cellCounts.
Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU
by
ksong
• 0
Hi Dr Sudbery, yes I found looking at the coverage in IGV helps a lot. I did find some differences between CDS and UTR and between samples.…
Votes
Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU
C: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o
Comment: Diffbind dba$binding slot finding Chr21 for an MM10 dataset
Answer: Handling NA values in limma's voom design matrix
Answer: Handling NA values in limma's voom design matrix
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