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Comment: Limma beta coefficient confidence intervals by fluentin44 • 0

Unfortunately that returns the confidence intervals for logFC, not the B statistic.

Comment: Alternative for wininet method in tximeta by uhlkatie • 0

This worked perfectly. Thank you!

Answer: Limma beta coefficient confidence intervals by James W. MacDonald 60k

see ?topTable. You can simply add confint = TRUE

Answer: Confused about the CPM and TMM normalization in edgeR by Gordon Smyth 45k

There's no such thing as TMM normalized counts, as the edgeR document tells you. This link might help: https://www.biostars.org/p/9475236/

Comment: batchelor correctExperiments() returns Error in eval(subscript, envir = eframe, by pcantalupo • 0

It worked...thank you Aaron

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Answer: Limma beta coefficient confidence intervals

A: Samples without pair in paired design experiment

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