Showing : methyAnalysis • reset
1
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9
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3.6k
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strange results from differential methylation analysis using limma
limma methylation methyanalysis IMA
updated 23 months ago by 21k • written 7.1 years ago by • 0
0
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6
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3.0k
views
DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
updated 10.1 years ago by 65k • written 10.1 years ago by ★ 13k
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2
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1.7k
views
Loading Data into MethyAnalysis
Microarray methyAnalysis Microarray methyAnalysis
updated 11.3 years ago by ▴ 440 • written 11.3 years ago by ★ 13k
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2
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1.3k
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genoset:::initGenoSet
methyAnalysis methyAnalysis
updated 11.2 years ago by ▴ 440 • written 11.2 years ago by ▴ 20
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8
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2.2k
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methyAnalysis for DMR identification
convert methyAnalysis convert methyAnalysis
updated 10.1 years ago by ▴ 160 • written 10.1 years ago by ★ 13k
1
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5
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1.3k
views
Understanding methyAnalysis Results
methyAnalysis methyanalysis methylation illuminahumanmethylation450k.db
updated 9.1 years ago by ▴ 80 • written 9.1 years ago by ▴ 370
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4.1k
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methyAnalysis M values and Beta Values
methyAnalysis methyanalysis 450k
updated 9.1 years ago by ▴ 80 • written 9.1 years ago by ▴ 370
1
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13
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2.2k
views
MethylAid package visualize function not opening a web browser
illimina 450k methylation methyanalysis methylaid
8.5 years ago jdangelo • 0
4
votes
10
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4.4k
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Illumina MethylationEPIC vs. 450K
methylumi minfi illuminahumanmethylation450k.db 450k methyanalysis
updated 8.1 years ago by ▴ 700 • written 8.1 years ago by ▴ 50
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1
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912
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problem with identifySigDMR command
methyAnalysis
7.7 years ago yuping.zhang • 0
1
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2
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1.4k
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Methylation data visualization using methyAnalysis with minfi
methylation microarray illumina minfi methyanalysis
updated 5.3 years ago by ★ 1.3k • written 5.3 years ago by • 0
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1
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1.1k
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methyAnalysis methyGenoSet function
methyAnalysis methyAnalysis
updated 11.3 years ago by 21k • written 11.3 years ago by ▴ 10
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0
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1.2k
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
11.3 years ago Pan Du ▴ 440
2
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4
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2.6k
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Problem in installing Bioconductor packages due to "IRanges"
lumi methylumi methyAnalysis
6.3 years ago topijush ▴ 10
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0
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methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
6.2 years ago mcahn • 0
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0
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608
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression methyAnalysis MethylationArray
3.4 years ago coobzie • 0
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0
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1.7k
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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer charm minfi methyAnalysis Cancer charm minfi methyAnalysis
11.2 years ago Ed Schwalbe ▴ 20
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0
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988
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methyAnalysis: heatmapByChromosome not works
methyAnalysis
7.5 years ago Shicheng Guo • 0
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0
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1.7k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
10.1 years ago Allegra Petti ▴ 120
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0
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1.7k
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methyAnalysis error with example data
methyanalysis
7.9 years ago Tom ▴ 10
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0
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803
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Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
6.4 years ago charleneee95 • 0
21 results • Page 1 of 1
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Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0
Hi Gordon, thank you so much for your guide! I check my data as you said there is no difference in my data. This is the MDS plot at genes l…
Comment: How to correct for known and surrogate variables in DESeq2? by Michael Love 41k
To question 3: if you model technical variation using only ~group vs ~1, then it will be correlated with known technical variables, which y…
Answer: flowStats Search Error by shepherl 3.8k
We are aware of an issue with bioconductor.org search and are investigating. We apologize for an inconvenience this is causing.
Comment: How to correct for known and surrogate variables in DESeq2? by nhaus ▴ 30
Hey Crystal, did you end up getting advice? I am facing the exact same questions that you are having right now. Would be very grateful if y…
Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.8k
previously unannounced, COHCAP is not deprecated but removed with release 3.19. see [mailing list discussion](https://stat.ethz.ch/piperm…
Votes
C: Add new columns to DESeqResults from text file by matching rownames.
Answer: geneList error in clusterprofiler
Comment: Memory errors using read.bismark?
Comment: Not fully paired differential gene expression analysis
Comment: [DiffBind] Obtaining normalization factors
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