Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
methyanalysis
•
reset
0
votes
0
replies
608
views
Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression
methyAnalysis
MethylationArray
3.4 years ago
coobzie
• 0
1
vote
2
replies
1.4k
views
Methylation data visualization using methyAnalysis with minfi
methylation
microarray
illumina
minfi
methyanalysis
updated 5.3 years ago by
Ou, Jianhong
★ 1.3k • written 5.3 years ago by
Adam_M
• 0
0
votes
0
replies
717
views
methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
6.2 years ago
mcahn
• 0
2
votes
4
replies
2.6k
views
Problem in installing Bioconductor packages due to "IRanges"
lumi
methylumi
methyAnalysis
6.3 years ago
topijush
▴ 10
0
votes
0
replies
804
views
Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
6.4 years ago
charleneee95
• 0
1
vote
9
replies
3.6k
views
strange results from differential methylation analysis using limma
limma
methylation
methyanalysis
IMA
updated 23 months ago by
Sean Davis
21k • written 7.1 years ago by
RC
• 0
0
votes
0
replies
989
views
methyAnalysis: heatmapByChromosome not works
methyAnalysis
7.5 years ago
Shicheng Guo
• 0
0
votes
1
reply
913
views
problem with identifySigDMR command
methyAnalysis
7.7 years ago
yuping.zhang
• 0
0
votes
0
replies
1.7k
views
methyAnalysis error with example data
methyanalysis
7.9 years ago
Tom
▴ 10
4
votes
10
replies
4.4k
views
Illumina MethylationEPIC vs. 450K
methylumi
minfi
illuminahumanmethylation450k.db
450k
methyanalysis
updated 8.2 years ago by
Peter Hickey
▴ 740 • written 8.2 years ago by
Ahdee
▴ 50
1
vote
13
replies
2.2k
views
MethylAid package visualize function not opening a web browser
illimina 450k methylation
methyanalysis
methylaid
8.5 years ago
jdangelo
• 0
0
votes
1
reply
4.1k
views
methyAnalysis M values and Beta Values
methyAnalysis
methyanalysis
450k
updated 9.1 years ago by
Pan Du
▴ 80 • written 9.1 years ago by
andrew.j.skelton73
▴ 370
1
vote
5
replies
1.3k
views
Understanding methyAnalysis Results
methyAnalysis
methyanalysis
methylation
illuminahumanmethylation450k.db
updated 9.1 years ago by
Pan Du
▴ 80 • written 9.1 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
1.7k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
10.1 years ago
Allegra Petti
▴ 120
0
votes
8
replies
2.2k
views
methyAnalysis for DMR identification
convert
methyAnalysis
convert
methyAnalysis
updated 10.2 years ago by
Giovanni Calice
▴ 160 • written 10.2 years ago by
Guest User
★ 13k
0
votes
6
replies
3.0k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
updated 10.2 years ago by
James W. MacDonald
65k • written 10.2 years ago by
Guest User
★ 13k
0
votes
0
replies
1.7k
views
Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer
charm
minfi
methyAnalysis
Cancer
charm
minfi
methyAnalysis
11.2 years ago
Ed Schwalbe
▴ 20
0
votes
2
replies
1.3k
views
genoset:::initGenoSet
methyAnalysis
methyAnalysis
updated 11.2 years ago by
Pan Du
▴ 440 • written 11.2 years ago by
Schalkwyk, Leonard
▴ 20
0
votes
2
replies
1.7k
views
Loading Data into MethyAnalysis
Microarray
methyAnalysis
Microarray
methyAnalysis
updated 11.3 years ago by
Pan Du
▴ 440 • written 11.3 years ago by
Guest User
★ 13k
0
votes
1
reply
1.1k
views
methyAnalysis methyGenoSet function
methyAnalysis
methyAnalysis
updated 11.3 years ago by
Sean Davis
21k • written 11.3 years ago by
Giancarlo
▴ 10
0
votes
0
replies
1.2k
views
importing data problem with methyAnalysis package
Biophysics
Annotation
Preprocessing
annotate
lumi
methyAnalysis
Biophysics
Annotation
lumi
11.3 years ago
Pan Du
▴ 440
21 results • Page
1 of 1
Recent ...
Replies
Comment: How to make DGEList and design matrix by edgeR package
by
prity6459
• 0
Thank you for your suggestion. Yes, I have made DGEList and design matrix in my script. But I was not entirely confident while making thos…
Comment: Finding DEGs by using edgeR
by
prity6459
• 0
Hello Gordon, Thanks for your response. By normalization, I meant that I have already removed lowly expressed genes from my count matrix. …
Answer: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
It doesn't seem to me that there is necessarily any problem with the analysis. You that there are "too many low-reads" but actually there …
Answer: How to make DGEList and design matrix by edgeR package
by
Gordon Smyth
50k
Your question is curious because you showed code that made a DGEList and design matrix in your previous post just 15 hours ago. Please h…
Answer: Finding DEGs by using edgeR
by
Gordon Smyth
50k
I am not clear what you mean that you have already normalized your data. How exactly did you normalize the data? The best way to do an edg…
Votes
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
Awards
• All
Popular Question
to
Gordon Smyth
50k
Scholar
to
Peter Hickey
▴ 740
Popular Question
to
sropri
• 0
Popular Question
to
W. Evan Johnson
▴ 850
Popular Question
to
Alejandro Reyes
★ 1.9k
Locations
• All
WEHI, Melbourne, Australia,
just now
Germany,
3 minutes ago
Germany,
5 minutes ago
France,
9 minutes ago
France/Marseille/Inserm,
10 minutes ago
Traffic: 851 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6