Bioconductor Methylationepic

Showing : methylationepic • reset

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methylationEPIC minfi microarray epigenetics EPIC

5.1 years ago rmf ▴ 20

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818

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microarray methylationEPIC epigenetics minfi EPIC

5.1 years ago rmf ▴ 20

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ChAMP champ 2.9.10 methylationepic

6.1 years ago david.ch • 0

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rnbeads methylation methylationepic dna methylation

6.2 years ago gabrielrfries • 0

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champ methylationepic

updated 6.2 years ago by Yuan Tian ▴ 280 • written 6.2 years ago by csappleby-mallinder1 • 0

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ChAMP methylationepic epicarray epigenomics

updated 6.6 years ago by rcavalca ▴ 140 • written 6.6 years ago by karthikrpad ▴ 10

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885

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minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP

6.8 years ago Ellen O • 0

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methylation illumina EPIC methylationepic idat

updated 7.0 years ago by Guido Hooiveld ★ 3.9k • written 7.0 years ago by Ellen O • 0

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methylation epic microarray minfi methylationepic

7.1 years ago nhejazi • 0

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shinymethyl minfi epic microarray methylationepic qualitycontrol

7.2 years ago chelsey.ju • 0

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minfi illumina methylationEPIC densityplot

7.3 years ago annabelle.congras ▴ 10

11 results • Page 1 of 1

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Answer: Citation for edgeR user guide by Gordon Smyth 50k

Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

You are just making up data? What is the point of this exercise?

Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k

What do you mean by 'the information'? Do you have things in particular that you want?

Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

Votes

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Answer: Cannabis OrgDb

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