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Showing :
mfuzz
•
reset
3
votes
6
replies
491
views
Average biological replicates in RNA-seq
Mfuzz
RNASeq
8 weeks ago
boczniak767
▴ 720
0
votes
0
replies
296
views
Mfuzz package loading issues
Mfuzz
MacBook
loadingissues
5 months ago
Jon
• 0
0
votes
4
replies
621
views
Mfuzz package loading issues
Mfuzz
loadingissues
macbook
5 months ago
Jon
• 0
0
votes
2
replies
771
views
R: problem with running time-series analysis software: Mfuzz
time-series
mfuzz
replace=FALSE
23 months ago
soda
▴ 80
1
vote
1
reply
522
views
Fuzzy C means clustering
Mfuzz
updated 3.4 years ago by
James W. MacDonald
65k • written 3.4 years ago by
syed.imtiazaziz
• 0
0
votes
0
replies
606
views
Mfuzz time-series design
mfuzz
normalization
4.8 years ago
xizhang
• 0
3
votes
9
replies
2.4k
views
DESeq2 Normalized Counts for Mfuzz
deseq2
rnaseq
mfuzz
updated 5.7 years ago by
Michael Love
41k • written 5.7 years ago by
rbenel
▴ 40
0
votes
0
replies
920
views
PROBLEM WITH MFUZZ
mfuzz
fold change
log2
STANDARDISATION
5.8 years ago
prakashpandey1111
• 0
0
votes
0
replies
630
views
For optimal c and m using fuzzy c-means clustering
mfuzz
5.8 years ago
prakashpandey1111
• 0
1
vote
1
reply
1.3k
views
expression profiles between DESeq2 and Mfuzz
deseq2
mfuzz
differential expression
timecourse
updated 7.5 years ago by
Michael Love
41k • written 7.5 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
2
replies
2.0k
views
cluster composition in Mfuzz package
cluster
mfuzz
gene names
updated 8.1 years ago by
Assa Yeroslaviz
★ 1.5k • written 8.1 years ago by
thomas.dobrenel
• 0
1
vote
1
reply
5.5k
views
Mfuzz: fill.NA - Warning messages: argument is not numeric or logical: returning NA
mfuzz
clustering
bioinformatics
proteomics
timecourse
updated 8.2 years ago by
Laurent Gatto
1.6k • written 8.2 years ago by
under-waterworld
• 0
0
votes
0
replies
1000
views
Small bug in mfuzz.plot
Mfuzz
8.2 years ago
musically.ut
• 0
0
votes
0
replies
1.4k
views
mfuzz problems
Clustering
Mfuzz
Clustering
Mfuzz
9.9 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
1.0k
views
[Mfuzz] y-axis values
Clustering
Mfuzz
Clustering
Mfuzz
13.1 years ago
boczniak767
▴ 720
0
votes
2
replies
3.6k
views
[Mfuzz] Error in cmeans(exprs(eset)
Mfuzz
Mfuzz
13.1 years ago
boczniak767
▴ 720
0
votes
1
reply
1.5k
views
Mfuzz plot -pdf
Mfuzz
Mfuzz
updated 15.0 years ago by
James W. MacDonald
65k • written 15.0 years ago by
dorothyc
▴ 140
0
votes
1
reply
1.3k
views
Mfuzz package
Clustering
Mfuzz
Clustering
Mfuzz
updated 15.1 years ago by
James W. MacDonald
65k • written 15.1 years ago by
dorothyc
▴ 140
0
votes
4
replies
5.9k
views
Heatmap without using clustering result
Clustering
Mfuzz
Clustering
Mfuzz
updated 15.2 years ago by
Steve Pederson
▴ 60 • written 15.2 years ago by
gregory voisin
▴ 430
19 results • Page
1 of 1
Recent ...
Replies
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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James W. MacDonald
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shepherl
3.8k
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▴ 30
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50k
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Peter Hickey
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