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microarrays
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4
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5
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sample size determination in microarrays studies with limma analysis
limma
sample size
microarrays
statistical power
6.0 years ago
eleonoregravier
▴ 70
0
votes
6
replies
2.7k
views
not able to install geoquery package
microarrays
xml
RCurl
libxml2
libcurl
updated 7.1 years ago by
Martin Morgan
25k • written 7.1 years ago by
farahqureshi5
• 0
0
votes
0
replies
810
views
microarray data expression set
whole human genome microarray 4x44k
microarrays
7.1 years ago
farahqureshi5
• 0
5
votes
6
replies
1.4k
views
Confusing: identify differentially expression genes (DEG) perturbed by a drug in Limma
limma
cmap
microarrays
differential gene expression
7.2 years ago
kevin.m.hao
▴ 10
7
votes
4
replies
3.2k
views
Limma contrast for variables disease, gender and age
limma design matrix
limma
limma contrast matrix
microarrays
7.8 years ago
miyuki_iii
▴ 10
5 results • Page
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Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Chris
• 0
Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …
Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
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How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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