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minfiDataEPIC arrays limma minfi Epigenetics

updated 2.3 years ago by Gordon Smyth 47k • written 2.3 years ago by Jeff ▴ 20

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minfiData plotsex minfi minfiDataEPIC r

updated 2.1 years ago by suman • 0 • written 2.1 years ago by Bethan • 0

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minfiDataEPIC #SexPrediction minfi

updated 17 months ago by Basti ▴ 700 • written 17 months ago by nucasa • 0

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Quantile noob Normalization minfi minfiDataEPIC

updated 7 months ago by James W. MacDonald 62k • written 7 months ago by mikat • 0

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Comment: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R by Yang Shi ▴ 10

Thanks for your reply sir!

Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by Rory Stark ★ 4.6k

`dba.count()` counts reads overlapping consensus regions. After that, the original peak scores are ignored. All quantitative analysis (via …

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

I'd like to test: 1. Are there differences between treatment (cold vs regrowth) time profiles for each line? 2. Do lines react differentl…

Answer: Unable to create venndiagram using VennDiagram 1.5.1 package by konstantinernst • 0

Good boxers who are fighting be found on soccer-tips.ru click and you will be extremely sated.

Comment: Time-course, comparison of two groups by Gordon Smyth 47k

What hypothesis are you trying to test?

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Answer: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

A: Pathway analysis of differentially methylated CpGs

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

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