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Comment: does anyone how to create rarefaction curves from a phyloseq object?
by
RMiller
•
0
I am not sure what you have tried, but the "vegan" library (package) has the ability to do rarefaction.
So make sure to load `library("veg…
Answer: MSA package fails to be installed - installation of package ‘msa’ had non-zero
by
stitam
•
0
Hi, I came across the same issue when trying to install `msa` in a docker (singularity) container. My base image was `debian:bullseye-20230…
Comment: deseq2 nested multifactorial analysis
by
Basti
▴
700
The information on genotype is included in the condition : all Control_1 are A, all Control_2 are B
The condition variable is sufficient to…
Comment: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R
by
Yang Shi
▴
10
Thanks for your reply sir!
Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
by
Rory Stark
★
4.6k
`dba.count()` counts reads overlapping consensus regions. After that, the original peak scores are ignored. All quantitative analysis (via …
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