Bioconductor Minfidata

Showing : minfidata • reset

vote

replies

100

views

minfiData minfi

1 day ago • updated 6 hours ago clacarion • 0

votes

169

views

methylclockData minfi methylclock minfidata

updated 7 weeks ago by James W. MacDonald 65k • written 8 weeks ago by sharangiiv • 0

votes

replies

911

views

RnBeads minfiData minfi EPICarray

updated 11 months ago by Basti ▴ 780 • written 11 months ago by Jitendra ▴ 10

votes

replies

999

views

methylationArrayAnalysis minfiData minfi MethylationArrayData MethylationArray

updated 13 months ago by James W. MacDonald 65k • written 13 months ago by Grace • 0

votes

replies

1.2k

views

methylationArrayAnalysis minfiData minfi MethylationArrayData MethylationArray

written 13 months ago by Grace • 0

votes

replies

855

views

minfiData ChAMP

2.3 years ago behr201 • 0

votes

replies

724

views

minfi minfiData MethylationArrayData

2.7 years ago ponche_de_kiwi • 0

votes

2.0k

views

minfiData plotsex minfi minfiDataEPIC r

updated 3.2 years ago by suman • 0 • written 3.2 years ago by Bethan • 0

vote

replies

2.0k

views

minfi methylation dataimport minfidata missmethyl

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by moldach ▴ 20

votes

1.5k

views

minfi minfidata rgl. mac os x el capitan

updated 8.0 years ago by Kasper Daniel Hansen ★ 6.5k • written 8.0 years ago by holbrookjoanna • 0

votes

2.2k

views

minfidata minfi illuminahumanmethylation450k.db illuminahumanmethylation450kanno.ilmn12.hg19

9.0 years ago alejandretheodore • 0

votes

replies

1.9k

views

minfi minfidata illumina methylation dmpfinder

updated 9.6 years ago by James W. MacDonald 65k • written 9.6 years ago by michael.zulyniak • 0

12 results • Page 1 of 1

Recent ...

Replies

Answer: Use of negative binomial model for exponential decay rate estimation using DESeq by Michael Love 41k

Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …

Answer: Citation for edgeR user guide by Gordon Smyth 50k

Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

You are just making up data? What is the point of this exercise?

Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k

What do you mean by 'the information'? Do you have things in particular that you want?

Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Votes

Answer: Citation for edgeR user guide

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Awards • All