Bioconductor Minfidataepic

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minfiDataEPIC EpicV2

updated 7 months ago by Zuguang Gu ▴ 260 • written 8 months ago by Izabela.ams • 0

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minfiDataEPIC arrays limma minfi Epigenetics

updated 3.4 years ago by Gordon Smyth 50k • written 3.4 years ago by Jeff ▴ 20

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369

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minfiDataEPIC minfi

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by phelankj • 0

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Annotation annotate DifferentialMethylation minfiDataEPIC

updated 6 months ago by Basti ▴ 770 • written 6 months ago by titangerd • 0

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minfiDataEPIC methylationArrayAnalysis

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by rae.alshammari ▴ 10

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Quantile noob Normalization minfi minfiDataEPIC

updated 20 months ago by James W. MacDonald 65k • written 20 months ago by mikat • 0

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methylationArrayAnalysis minfi MethylationArrayData minfiDataEPIC MethylationArray

updated 12 months ago by Gordon Smyth 50k • written 12 months ago by Grace • 0

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286

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minfiDataEPIC minfi

updated 4 months ago by Basti ▴ 770 • written 4 months ago by Ana • 0

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minfiDataEPIC #SexPrediction minfi

updated 2.5 years ago by Basti ▴ 770 • written 2.5 years ago by nucasa • 0

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minfiData plotsex minfi minfiDataEPIC r

updated 3.1 years ago by suman • 0 • written 3.1 years ago by Bethan • 0

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minfi minfiDataEPIC

6 weeks ago Felix • 0

11 results • Page 1 of 1

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Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0

Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…

Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0

Thank you!

Comment: FGSEA pre-ranked input in increasing order or decreasing by alserg ▴ 240

They are reorder in the decreasing order.

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Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

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