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mlinterfaces
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ensemblVEP, variant_effect_predictor versions and release schedule
Cancer
MLInterfaces
bridge
ensemblVEP
AnnotationHub
Cancer
MLInterfaces
bridge
ensemblVEP
10.2 years ago
Valerie Obenchain
★ 6.8k
0
votes
2
replies
999
views
How to best include hyperparameter optimization in MLInterfaces?
MLInterfaces
MLInterfaces
updated 11.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.0 years ago by
Guest User
★ 13k
0
votes
0
replies
1.5k
views
Classification in Mass Spectrometry Data
Microarray
Classification
Cancer
Ovarian
PROcess
MLInterfaces
ASSIGN
Microarray
Cancer
11.4 years ago
McGee, Monnie
▴ 300
0
votes
2
replies
1.2k
views
xvalSpec('NOTEST') problem
MLInterfaces
MLInterfaces
updated 11.9 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.9 years ago by
Gustavo Fernández Bayón
▴ 440
0
votes
1
reply
1.0k
views
Need help with MLearn in MLInterfaces package
Clustering
MLInterfaces
Clustering
MLInterfaces
updated 15.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.1 years ago by
Tul Gan
▴ 10
0
votes
0
replies
1.2k
views
Bioconductor training course, Boston March 5-6-7 2008
aCGH
SNP
Genetics
Annotation
GO
Visualization
affy
limma
aCGH
MLInterfaces
Category
SNP
16.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
763
views
stat.diag.daB MLInterfaces
Classification
MLInterfaces
Classification
MLInterfaces
17.4 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
938
views
Error in xval: No Direct or Inherited Method for this call
Biobase
MLInterfaces
Biobase
MLInterfaces
17.5 years ago
mpg33@drexel.edu
▴ 90
0
votes
0
replies
1.1k
views
Error in xval: No Direct or Inherited Method for this call
Survival
Biobase
genefilter
MLInterfaces
Survival
Biobase
genefilter
MLInterfaces
17.5 years ago
Martin Morgan
25k
0
votes
3
replies
1.1k
views
xval in MLInterfaces package
MLInterfaces
MLInterfaces
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Wu, Xiwei
▴ 350
0
votes
1
reply
1.0k
views
MLInterfaces
GeneSpring
MLInterfaces
GeneSpring
MLInterfaces
updated 18.1 years ago by
Stephen Henderson
★ 1.0k • written 18.1 years ago by
Qi.Zhang@astrazeneca.com
▴ 60
11 results • Page
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Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
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