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Answer: spot- vs cell-level data access
by
Leonardo Collado Torres
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980
Hi,
The `SingleCellExperiment` object you can download with `fetch_data(type = "sce")` pre-dates the creation of `SpatialExperiment`. No…
Answer: unable to install.packages("spatialLIBD")
by
Leonardo Collado Torres
▴
980
Hi @kstern,
Thank you for your interest in `spatialLIBD`. You will still need the package in order to re-cast the object into a `Spatia…
Comment: Question regarding averaging DESeq2 results.
by
e.v.egeland
•
0
Thanks for your quick reply, Wolfgang.
Your answer does cover the essence of my question. I did initially apply both approaches discussed …
Comment: unable to install.packages("spatialLIBD")
by
shepherl
3.2k
I guess it depends on what you mean by only getting the datasets? You can clone the package with `git clone https://git.bioconductor.org/p…
Comment: Which is the best type of data for correlation or survival analysis
by
Yang Shi
•
0
Thanks for your reply and your excellent package! Could you please tell me the **difference bwtween vst transformed data and the "vtd" base…
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