written 16 months ago by
wilson_ava
•
0
0
votes
2
replies
830
views
0
votes
0
replies
1.5k
views
4.7 years ago
Chris Seidel
▴
80
0
votes
0
replies
1.3k
views
2
votes
5
replies
3.4k
views
updated 7.6 years ago by
Valerie Obenchain
★
6.8k
•
written 7.6 years ago by
svlachavas
▴
840
0
votes
0
replies
1.2k
views
8.1 years ago
priyankaraina10
•
0
0
votes
2
replies
1.6k
views
updated 10.2 years ago by
Simon Coetzee
▴
50
•
written 10.2 years ago by
ashley.doane
▴
20
Recent ...
Replies
Comment: Joining different datasets and analyzing using the group-specific condition effe
by
James W. MacDonald
68k
There is an example of how you can do this in the [DESeq vignette][1].
An alternative would be to fit a linear mixed model using the `vari…
Comment: Joining different datasets and analyzing using the group-specific condition effe
by
jason.chai
•
0
@mikelove Could I please ask if a similar method would work my set of samples?
I have 255 samples which have been generated from 76 subject…
Comment: Clarification on counting in Rsubread (featureCounts)
by
Luca
•
0
Thanks to both of you for your helpful suggestions.
The counting was already strand-specific at both the exon and gene levels. I resolved …
Comment: Clarification on counting in Rsubread (featureCounts)
by
Gordon Smyth
53k
Have you told featureCounts to do strand-specific counting?
As pointed out by Frances Turner, you can lose reads if they overlap the gene …
Answer: Clarification on counting in Rsubread (featureCounts)
by
Frances Turner
▴
20
You should look at the summary files produced by feature counts. This gives a breakdown of what happened to reads that were not assigned. Y…
Votes
Awards
• All
Commentator to
James W. MacDonald
68k
Great Question to
fl
▴
20
Popular Question to
Lluís Revilla Sancho
▴
760
Popular Question to
Gordon Smyth
53k
Popular Question to
Aleena_Ensembl
▴
30
Locations
• All
Pakistan, 4 minutes ago
United States, 9 minutes ago
United States, 14 minutes ago
United Kingdom, 23 minutes ago
Germany, 30 minutes ago
Pakistan, 4 minutes ago
United States, 9 minutes ago
United States, 14 minutes ago
United Kingdom, 23 minutes ago
Germany, 30 minutes ago
Traffic: 1598 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6