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mutationalpatterns
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4
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1.8k
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Error in seqlevelsStyle after creating a BSgenome package
bsgenome
MutationalPatterns
4.1 years ago • updated 4.0 years ago
sibyl.bertrand
• 0
2
votes
2
replies
969
views
MutationalPatterns Signature Database Versions
MutationalPatterns
2.9 years ago
Dario Strbenac
★ 1.5k
0
votes
2
replies
579
views
could not find function "get_known_signatures"
MutationalPatterns
updated 16 months ago by
Vincent J. Carey, Jr.
6.7k • written 16 months ago by
anton.kratz
▴ 60
0
votes
0
replies
1.3k
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Error in NMF estimation
MutationalPatterns
NMF
4.9 years ago
TRASA
• 0
0
votes
0
replies
644
views
Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
2.7 years ago
Negar
• 0
5 results • Page
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Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with doctor know about Alzheimer and they don't expect significan…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Comment: Methylation Analysis experiment design using Limma
by
hortense96
• 0
Hi, Thank you very much for your answer. It's true that I only used 6 samples for this analysis, which is consistent with your explanation…
Comment: Error using champ.import
by
shilpa
• 0
I'm having same issues too. Did anyone manage to resolve it?
Answer: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
You don't explain how many samples you have (columns of data), but the warning message shown in your post would arise if there are in fact …
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
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