Bioconductor Nanostring

Showing : nanostring • reset

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nanostring limma

updated 9.0 years ago by ker61 ▴ 20 • written 9.0 years ago by mali salmon ▴ 370

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NanoString Differential Expressed Genes Analysis DESeq2

updated 2.3 years ago by Clara • 0 • written 4.7 years ago by lim6432 ▴ 50

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5.4k

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deseq2 nanostring

updated 5.9 years ago by Michael Love 41k • written 5.9 years ago by casey.rimland ▴ 150

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3.4k

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deseq2 variancestabilizingtransformation nanostring

updated 7.0 years ago by Michael Love 41k • written 7.0 years ago by johnmcma ▴ 10

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ExpressionSet Assay NanoString Error Data

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by junli1988 • 0

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nanostringdiff nanostring NanoStringDiff

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by casey.rimland ▴ 150

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1.9k

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nanostring normalization

8.5 years ago alakatos ▴ 130

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1.9k

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NanoStringDiff NanoString nCounter DE analysis

updated 5 months ago by georgersmith • 0 • written 4.7 years ago by lim6432 ▴ 50

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1.6k

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RUV Nanostring RUV-III

updated 4.0 years ago by hermidalc ▴ 20 • written 4.7 years ago by raf4 ▴ 20

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deseq2 nanostring

4.3 years ago acs1990 ▴ 10

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plotRLE Nanostring RUVSeq DESEQ2

2.8 years ago xiaofeiwang18266 ▴ 50

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1.5k

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NanoNormIter DifferentialExpression Housekeeping DESeq2 NanoString

updated 2.2 years ago by Michael Love 41k • written 2.2 years ago by argonvibio • 0

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1.4k

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GSVA Nanostring

5.8 years ago • updated 5.0 years ago SB • 0

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1.3k

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nanostring NanoStringDiff design and contrast matrix differential gene expression ncounter

6.7 years ago c.kohler • 0

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differential gene expression nanostring confounding factors

updated 5.3 years ago by James W. MacDonald 65k • written 5.3 years ago by Guillaume Robert • 0

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deseq2 confounders nanostring rnaseq differential gene expression

updated 6.1 years ago by Michael Love 41k • written 6.1 years ago by kim.malek88 • 0

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961

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limma nanostring contrasts

updated 4.6 years ago by Gordon Smyth 50k • written 4.6 years ago by uridavid.akavia • 0

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693

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GSVA Normalization BatchEffect GSVAdata NanoString

15 months ago Zhijie • 0

18 results • Page 1 of 1

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Comment: flowStats Search Error by SamGG ▴ 350

So do I. The direct URL is https://bioconductor.org/packages/3.18/bioc/html/flowStats.html

Comment: Interaction Terms in DESeq2 - Shrinkage by andrebolerbarros ▴ 20

Thanks for your suggestion! For `apeglm` shrinkage, on that scenario, I would have to relevel the variable and then re-run with `nbinomWal…

Answer: Interaction Terms in DESeq2 - Shrinkage by swbarnes2 ★ 1.3k

I think the simpler way to do it is to make a new column of conc_time_tissue all stuck together, and make that column your design. Then …

Comment: SingleR Label.Ont by lisia • 0

De online casino's bij [One Casino][1] zullen je achterlaten met de mooiste herinneringen. De site geeft je een geweldige kans om een keuze…

Comment: GSVA error by Alex • 0

Thank you, Robert! The update sorted everything out.

Votes

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var