Bioconductor Nanostringdiff

Showing : nanostringdiff • reset

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812

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NanoStringDiff clusterProfiler fgsea

10 months ago pg45863 ▴ 10

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834

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DESeq2 NanoStringDiff limma

11 months ago pg45863 ▴ 10

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620

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GEOquery MicroarrayData Normalization Microarray NanoStringDiff

updated 14 months ago by James W. MacDonald 65k • written 14 months ago by Aleksandra • 0

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509

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NanoStringDiff

updated 16 months ago by James W. MacDonald 65k • written 16 months ago by Paraskevi • 0

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543

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DifferentialExpression NanoStringDiff

2.4 years ago sanrie10 • 0

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1.5k

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limma edgeR DESeq2 NanoStringDiff

updated 2.6 years ago by James W. MacDonald 65k • written 2.6 years ago by reberya • 0

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962

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Nan NanoStringDiff

2.8 years ago choijamts • 0

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1.9k

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NanoStringDiff NanoString nCounter DE analysis

updated 5 months ago by georgersmith • 0 • written 4.7 years ago by lim6432 ▴ 50

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649

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NanoStringDiff

3.1 years ago YM • 0

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891

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Bioconductor Transcriptomics NanoStringDiff

updated 3.5 years ago by Laurent Gatto 1.6k • written 3.5 years ago by Pedro ▴ 10

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1.1k

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NanoStringDiff

4.3 years ago stephen.pollo • 0

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865

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NanoStringDiff GLM Gene expression

updated 4.7 years ago by James W. MacDonald 65k • written 4.7 years ago by Guillaume Robert • 0

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1.4k

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NanoStringDiff

updated 3 months ago by pjanas • 0 • written 4.9 years ago by noelleenright ▴ 10

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1.9k

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nanostringdiff nanostring NanoStringDiff

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by casey.rimland ▴ 150

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1.3k

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nanostring NanoStringDiff design and contrast matrix differential gene expression ncounter

6.8 years ago c.kohler • 0

15 results • Page 1 of 1

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Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Comment: Limma design with continuous and categorical covariates by hortense96 • 0

Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …

Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Votes

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

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Scholar to Gordon Smyth 50k