updated 3.2 years ago by
tcalvo
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written 3.2 years ago by
megha.hs28
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Comment: European Bioconductor Conference 2023 planning
by
rasafreelancer
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@[chill guy clicker][1] Sounds like a fantastic opportunity! I'm really curious about the emerging technologies that will be highlighted at…
Answer: How to extract coordinates of mismatches from a BAM file lodaded in as a GAlignm
by
Hervé Pagès
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This should be fast:
```r
library(GenomicAlignments)
extractMismatchesFromGAlignments <- function(ga)
{
stopifnot(is(ga, "GAlign…
Answer: GAlignments Cigar to GRanges
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Hervé Pagès
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```r
> as(gal, "GRangesList")
GRangesList object of length 2:
[[1]]
GRanges object with 2 ranges and 0 metadata columns:
seqnames …
Comment: DESEq2 comparison with mulitple cell types under 2 conditions
by
boczniak767
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740
Dear @mikelove ,
this method is very appealing but does it avoid making not meaningful comparisons like "1KO" vs "2WT" (using example fro…
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James W. MacDonald
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You can always grab things from the cache if you want to save or share, but that's not part of the paradigm, so there aren't direct facilit…
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