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FrozenRMA how to
Microarray Network hgu133plus2 Biobase PROcess KEGGSOAP beadarray EBImage edgeR frma
updated 13.7 years ago by ▴ 830 • written 13.7 years ago by ▴ 20
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IS PROGRAMMER/ANALYST I / 40 HOUR / DAY / BWH - CHANNING LABORATORY
Epigenetics Annotation Network Epigenetics Annotation Network
13.7 years ago Guest User ★ 13k
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Error in gammaFitEM for library(lumi) [Possible Bug]
Preprocessing Network Preprocessing Network
updated 13.7 years ago by ▴ 440 • written 13.8 years ago by ▴ 10
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Open Position :: Postdoc in systems genetics in Cambridge
Transcription Genetics Visualization Network Cancer Breast Lung Transcription Genetics
13.7 years ago Florian Markowetz ▴ 20
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RNA-seq Workshop An introductory course to RNA-seq 1st-2nd March 2012 Torino, Italy
Network Network
13.9 years ago rcaloger ▴ 500
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objective criterion for identification of outlying arrays by pca
Network Bayesian Cancer Network Bayesian Cancer
14.0 years ago shirley zhang ★ 1.0k
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Postdoctoral positions at EMBL
Sequencing Genetics GO Network Cancer genomes Sequencing Genetics GO Network Cancer
14.1 years ago Wolfgang Huber ★ 13k
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1.7k
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bug in rendering reciprocal edges?
Network graph Rgraphviz Network graph Rgraphviz
updated 14.2 years ago by ▴ 340 • written 14.2 years ago by ▴ 20
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Can we apply WGCNA to RNA-seq dataset?
Network Clustering Network Clustering
14.2 years ago Biase, Fernando ▴ 150
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2
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1.8k
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RV: wgcna
Network Cancer Network Cancer
updated 14.3 years ago by ★ 3.4k • written 14.3 years ago by ▴ 50
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2.5k
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Rgraphviz plot of bnlearn object with text too big
Network Bayesian Rgraphviz Network Bayesian Rgraphviz
14.4 years ago João Daniel Nunes Duarte ▴ 30
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1.9k
views
Bioconductor 2.8 is released
SNP Sequencing miRNA Microarray Annotation Normalization Pathways Preprocessing Network
updated 14.6 years ago by ▴ 310 • written 14.6 years ago by ★ 8.2k
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1.9k
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Which resources for pathway analysis?
Pathways Network SPIA DEGraph Pathways Network SPIA DEGraph
updated 14.7 years ago by ▴ 370 • written 14.7 years ago by ▴ 100
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4
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[R] RCytoscape setPosition error
Network Cancer graph Network Cancer graph
updated 14.7 years ago by ▴ 250 • written 14.7 years ago by ★ 1.1k
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Fwd: question regarding to MLInterface
Network Classification Network Classification
15.0 years ago Vincent J. Carey, Jr. 6.7k
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1.2k
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question regarding to MLInterface
Network Network
updated 15.0 years ago by ▴ 60 • written 15.0 years ago by ▴ 60
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1.3k
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Downloading metabolic pathway data from KEGG
Network graph Network graph
15.0 years ago Tim Clough ▴ 10
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1.7k
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Bioconductor 2.7 is released
BiocViews aCGH Transcription RNASeq miRNA Microarray Normalization Network Bayesian aCGH
15.1 years ago Martin Morgan 25k
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1.1k
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Aniket Mishra wants to stay in touch on LinkedIn
Network Network
15.1 years ago Aniket Vatsya ▴ 40
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2.1k
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BioNet - interpretation of node score (Eva Benito Garagorri)
SNP Microarray GO Network Clustering Cancer Organism mgug4122a probe limma convert SNP
15.1 years ago Daniela Beißer ▴ 20
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1.3k
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BioNet - interpretation of node score
Microarray Visualization Network BioNet Microarray Visualization Network BioNet
15.1 years ago Eva Benito Garagorri ▴ 70
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Agi4x44PreProcess- RSQLite driver: (RS_SQLite_fetch: failed first step: disk I/O error)
Network mgug4122a probe Network mgug4122a probe
15.1 years ago Brown, Joseph ▴ 20
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1.3k
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SPIA with Mouse Data
Genetics Network Organism SPIA Genetics Network Organism SPIA
15.2 years ago Will Bush ▴ 10
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2
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1.3k
views
Network plot
Network Network
updated 15.4 years ago by 21k • written 15.4 years ago by ▴ 100
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2
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1.8k
views
proposed: a bridge between R and Cytoscape
Visualization Network graph Visualization Network graph
updated 15.4 years ago by ★ 13k • written 15.4 years ago by ★ 1.1k
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19k
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1000 R tutorials/Links
Sequencing Microarray Genetics Visualization Network Bayesian Classification Clustering
15.4 years ago David Lyon ▴ 340
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3
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1.8k
views
tool for drawing interaction network
Pathways Network Pathways Network
updated 15.5 years ago by ▴ 220 • written 15.5 years ago by ★ 4.1k
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1.1k
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Error encountered while using AMORE package. "Error in train.method(net, P, T, show.step)...."
Network Network
15.5 years ago Suyog Pol ▴ 40
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1.7k
views
AgiMicroRna package is not available at bioconductor or not in active form???
Microarray Network microRNA AgiMicroRna Microarray Network microRNA AgiMicroRna
updated 15.6 years ago by ▴ 60 • written 15.6 years ago by 21k
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3
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2.1k
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identifying network communities in a protein-protein interaction graph
Network Network
updated 15.8 years ago by ▴ 80 • written 15.8 years ago by ▴ 190
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6
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2.0k
views
Regarding KEGGgraph
Pathways Network PROcess Pathways Network PROcess
updated 15.8 years ago by ★ 13k • written 15.8 years ago by ▴ 270
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1.5k
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Bioconductor 2.5 is released
Sequencing miRNA Microarray qPCR Annotation Network Bayesian Regression CGH stam Rintact
16.0 years ago Patrick Aboyoun ★ 1.6k
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1.0k
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Yingfang Tian has sent you a Desktopdating invitation
Network Network
16.0 years ago Yingfang Tian ▴ 20
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0
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2.2k
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qPCR Events and 30% Discount on qPCR workshops
miRNA qPCR Epigenetics GO Visualization Network probe microRNA miRNA qPCR Epigenetics
16.0 years ago qPCR Platform - the reference in real-t… ▴ 170
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0
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952
views
Einladung in mein Netzwerk auf LinkedIn
Network Network
16.1 years ago Jitao David Zhang ▴ 340
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1.2k
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Hypergraph representation of reactions
Network graph hypergraph Network graph hypergraph
updated 16.1 years ago by ★ 5.5k • written 16.1 years ago by ▴ 570
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1.0k
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Hypergraph representation of reactions
Network hypergraph Network hypergraph
16.1 years ago Anand Gavai ▴ 10
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1
reply
967
views
Neural networks.
Network Cancer Network Cancer
updated 16.2 years ago by ★ 13k • written 16.2 years ago by ▴ 20
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0
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813
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Invitation to connect on LinkedIn
Network Network
16.2 years ago Lingsheng Dong ▴ 80
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1.3k
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bioinformatics programmer position
Network Network
16.4 years ago Wall, Dennis Paul ▴ 80
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757
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Software Demo for Summer Research Grant
Network Network
16.5 years ago RICHARD SEGALL ▴ 10
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2.2k
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Post Doc position, Berlin Germany
Sequencing Microarray Proteomics Pathways Network Cancer Sequencing Microarray Proteomics
16.5 years ago Paul Hammer ▴ 220
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3
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1.7k
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building enzyme centric metabolic network
Network KEGGSOAP Network KEGGSOAP
updated 16.5 years ago by 25k • written 16.6 years ago by ▴ 270
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2
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1.2k
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KEGG analysis
Network Cancer Network Cancer
16.6 years ago Daniel Brewer ★ 1.9k
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2.2k
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vacancy postdoc or PhD in the Netherlands
Metabolomics Network Organism Metabolomics Network Organism
16.6 years ago Hendriks, M. ▴ 10
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1
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1.1k
views
network analyses on genes or probesets
Microarray Annotation Normalization Preprocessing Network Microarray Annotation Network
updated 16.6 years ago by ★ 7.2k • written 16.6 years ago by ▴ 380
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1.5k
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interaction analysis
Transcription Microarray Network qpgraph Transcription Microarray Network qpgraph
16.7 years ago Robert Castelo ★ 3.4k
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937
views
New Bioconductor package: qpgraph
Microarray Network Microarray Network
16.7 years ago Robert Castelo ★ 3.4k
0
votes
7
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2.4k
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Kegg pathway --> gene network
Pathways Network Pathways Network
updated 16.9 years ago by 25k • written 16.9 years ago by ▴ 40
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6
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2.0k
views
Network install of packages
Network Network
updated 17.0 years ago by 21k • written 17.0 years ago by ▴ 20
180 results • Page 3 of 4
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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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