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Answer: OrgDb for maize
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I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: FGSEA pre-ranked input in increasing order or decreasing
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They are reorder in the decreasing order.
Comment: significant difference of p-values with dream() after updating VariancePartition
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Thanks for your reply @gabrielhoffman !
I've been trying to isolate the changes, and v1.32.5 had the same results as v1.33.1 while v1.30.0…
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