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noiseq
•
reset
3
votes
6
replies
1.7k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 2.3 years ago by
Michael Love
41k • written 3.6 years ago by
andreia
▴ 10
0
votes
5
replies
3.7k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 7.0 years ago by
Michael Love
41k • written 7.0 years ago by
glmazzo
▴ 10
0
votes
4
replies
2.0k
views
NOISeq installation error
NOISeq
NOISeq
updated 11.5 years ago by
Sean Davis
21k • written 11.5 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
3
replies
1.5k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 6.7 years ago by
James W. MacDonald
65k • written 6.7 years ago by
Mau
▴ 50
0
votes
2
replies
905
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 3.3 years ago by
ATpoint
★ 4.0k • written 3.3 years ago by
Themis
• 0
0
votes
2
replies
2.7k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 11.5 years ago by
Dan Tenenbaum
★ 8.2k • written 11.5 years ago by
Guest User
★ 13k
0
votes
1
reply
442
views
Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 8 months ago by
ATpoint
★ 4.0k • written 8 months ago by
Rutuja
• 0
1
vote
1
reply
750
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
22 months ago
Pratibha
▴ 10
0
votes
1
reply
806
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
4.9 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
979
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.2 years ago
aokoro
• 0
0
votes
0
replies
1.0k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
11.2 years ago
Guest User
★ 13k
0
votes
0
replies
1.3k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
8.5 years ago
lina.faller
▴ 10
0
votes
0
replies
1.5k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
0
votes
0
replies
1.1k
views
NOISeq-real input parameters
NOISeq
NOISeq
12.1 years ago
Guest User
★ 13k
0
votes
0
replies
945
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
6.0 years ago
Aurora
▴ 20
0
votes
0
replies
649
views
NOISeq 'readData' not writing correctly
software error
NOISeq
4.8 years ago
jledmondson
• 0
0
votes
0
replies
670
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
4.7 years ago
ag1805x
▴ 80
17 results • Page
1 of 1
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Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Answer: List of Deprecated Packages for Bioc3.19
by
shepherl
3.8k
singleCellTK has been fixed and will remain in Bioconductor
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Yes, I'm working only with genes from terpenoids pathway (14 genes), so I can't use enrichGO? Can you recommend a package or something like…
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
Your awnser at Cannabis orgDb solve my problems using enrichGO by far. I'm underdegree biotechnology student, and I learning bioinformatic…
Votes
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
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