Bioconductor Nondetects

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491

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nondetects qPCR qPCRData

2.9 years ago jhackett ▴ 30

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1.7k

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nondetects software error

updated 6.2 years ago by corocla • 0 • written 6.3 years ago by Ryan C. Thompson ★ 7.9k

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575

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bug nondetects HTqPCR

updated 6 months ago by Nat.Nataren • 0 • written 7 months ago by Ed Siefker ▴ 230

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241

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qPCR nondetects

5 months ago Ed Siefker ▴ 230

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843

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nondetects qpcrImpute

updated 4.9 years ago by Matthew McCall ▴ 830 • written 5.2 years ago by D.J.Coulson2 • 0

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2.0k

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qPCRset object nondetects r package txt

updated 6 months ago by Nat.Nataren • 0 • written 6.3 years ago by s.m.may • 0

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1.3k

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nondetects R PCR

updated 6.7 years ago by Matthew McCall ▴ 830 • written 6.7 years ago by garciaii_antuerpia • 0

7 results • Page 1 of 1

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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…

Answer: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by James W. MacDonald 65k

That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…

Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2 by SamGG ▴ 350

Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…

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biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

Supporter to JKim • 0