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normqpcr
•
reset
3
votes
4
replies
3.0k
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Using limma for the analysis of qPCR data
NormqPCR
EasyqpcR
qPCR
HTqPCR
limma
updated 2.5 years ago by
Ming
▴ 380 • written 3.2 years ago by
enricoferrero
▴ 660
0
votes
0
replies
608
views
Analyze ct data using HTqPCR
HTqPCR
R
NormqPCR
4.8 years ago
annesha
• 0
0
votes
0
replies
777
views
How to select HKGs using normqPCR
normqpcr
selecthkgs
normalization
6.2 years ago
s.m.may
• 0
5
votes
3
replies
1.2k
views
deltaCq error in package NormqPCR
normqpcr
deltaCq
qrt-pcr
8.2 years ago
jacorvar
▴ 40
0
votes
2
replies
3.0k
views
ReadqPCR: [[hkgs,]] incorrect number of dimensions
ReadqPCR
NormqPCR
ReadqPCR
NormqPCR
updated 11.1 years ago by
James Perkins
▴ 120 • written 11.1 years ago by
Guest User
★ 13k
0
votes
0
replies
1.1k
views
workflow from NormqPCR 5.1 to 5.3
qPCR
NormqPCR
qPCR
NormqPCR
11.2 years ago
James Perkins
▴ 120
0
votes
0
replies
1.1k
views
workflow from NormqPCR 5.1 to 5.3
qPCR
NormqPCR
qPCR
NormqPCR
11.2 years ago
Guest User
★ 13k
0
votes
1
reply
1.2k
views
NormqPCR and ReadqPCR
GO
ReadqPCR
NormqPCR
GO
ReadqPCR
NormqPCR
updated 12.2 years ago by
james perkins
▴ 300 • written 12.2 years ago by
Pepijn Kooij
▴ 10
8 results • Page
1 of 1
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Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Answer: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
swbarnes2
★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error
by
James W. MacDonald
65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Votes
C: when to apply quantile normalization with voom in limma/voom framework with RNA-
A: How to know if I should use voomWithQualityWeights() or not?
A: Weird results (ribosomal proteins / Y-linked genes) in limma/voom
Answer: Log-cpm values from limma
Answer: Log-cpm values from limma
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