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Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 1.9k
Hi Karen, I've created the `EnsDb` (for Ensembl release 106, which corresponds to ensemblgenomes release 53). You can download the file fr…
Answer: rtracklayer S.h by James W. MacDonald 59k
You should get the dockerfile from [Bioconductor][1]. [1]: http://www.bioconductor.org/help/docker/
Answer: HTSeq Counts no longer available by j.arizanova • 0
Hi, can I ask a follow up question as I am facing exactly the same issue... The "STAR - Counts" workflow seems to generate augmented_star_g…
Comment: AssignChromosomeRegion not working in Rstudio 4.2 by Ou, Jianhong ★ 1.3k
Hi Abhilansh, Thank you for trying ChIPpeakAnno for your data. Could you please edit your post again? I am not sure I can follow your desc…
Comment: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o by James W. MacDonald 59k
Please don't add comments onto years-old posts. Instead make a new post.
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Answer: Variance explained (coefficient of determination) in edgeR
HTSeq Counts no longer available
Comment: Problem converting transcript to genomic coordinates with Annotation Hub
Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU
C: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o
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Popular Question to Johannes Rainer ★ 1.9k
Popular Question to Gordon Smyth 45k
Popular Question to Julie Zhu ★ 4.3k
Scholar to Hervé Pagès 15k
Commentator to James W. MacDonald 59k
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