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Showing :
ontology
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4
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Is there any description available for KEGG Pathway Edge Types
KEGG
SystemsBiology
KEGGgraph
ontology
17 months ago
Wuschel
▴ 10
1
vote
5
replies
1.2k
views
Gene Ontology analysis
ontology
edger
limma
ncbi
organism package
updated 4.0 years ago by
Gordon Smyth
50k • written 4.0 years ago by
babak.loghmani
▴ 20
1
vote
1
reply
1.1k
views
News:
Gene Ontology Official Workshop - Montreal, October 16, 2018
gene ontology
go
ontology
bioinformatics
genomics
News
5.5 years ago
laurent.albou
• 0
3
votes
3
replies
1.1k
views
Discrepancies between topGO output and input
go
topGO
gene
ontology
enrichment
updated 4.7 years ago by
James W. MacDonald
65k • written 4.7 years ago by
t.bergmann
• 0
3
votes
3
replies
1.1k
views
source of GO ontology and GO annotations in Bioconductor for GO.db
GO
ontology
GO.db
updated 5.5 years ago by
apkmirrorproject
• 0 • written 5.5 years ago by
marcinjoachimiak
▴ 10
1
vote
0
replies
743
views
adjusted p-values with topGO elim.KS method
topGO
Ontology
DifferentialExpression
18 months ago
Kevin Gregory
▴ 10
1
vote
2
replies
704
views
gene ontologies for a set of genes
gene
ontology
2.6 years ago
Bogdan
▴ 670
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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