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openblas
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oligo package blas error
rma
openblas
blas
oligo
2.0 years ago
ch_el
▴ 10
0
votes
0
replies
1.1k
views
OpenBLAS issue with ComBat() function of the R SVA package on Torque cluster
sva
R
OpenBLAS
updated 4.6 years ago by
James W. MacDonald
63k • written 4.6 years ago by
davide.chicco
• 0
1
vote
6
replies
1.5k
views
oligo: crash/segfault when fitting probelevel model
oligo
openblas
preprocessCore
updated 6.1 years ago by
James W. MacDonald
63k • written 6.1 years ago by
Guido Hooiveld
★ 3.7k
0
votes
3
replies
1.9k
views
failed to use multiple threads in R via openblas
wgcna
R
openblas
blas
threads
updated 6.3 years ago by
Martin Morgan
25k • written 6.3 years ago by
RC
• 0
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Answer: Is SeqSQC compatible with hg38?
by
James W. MacDonald
63k
I'll answer your question with a question. Is there any reason to believe that things like IBD or PCA or Sex checks would be dependent on t…
Comment: using featureCounts (Subread) to count only spliced reads per gene - behavior of
by
Gregory
• 0
Thanks for the prompt response, Gordon. I'm looking for count at the gene level - the gene id is the meta feature, so one row per gene in …
Comment: DiffBind handling of replicates and consensus
by
Rory Stark
★ 5.0k
You may want to try different values for the `normalize` parameter: dbObj <- dba.normalize(DBA = dbObj, library = "RiP", normalize=DBA…
Comment: DiffBind: dba.plotProfile(profiles)
by
Rory Stark
★ 5.0k
Yes, setting `raster_quality` down is a good way to address this issue. I've taken to using `raster_quality=1` in general as I think the pl…
Comment: DiffBind: dba.plotProfile(profiles)
by
Dorien
▴ 10
Not really an answer as I don't know really know why , but I also had the same issue and may have found a workaround ! If I set maxSites > …
Votes
Comment: biomaRt code/getBM function no longer importing 'coding' sequence via seqType ar
Comment: DiffBind: dba.plotProfile(profiles)
Answer: DiffBind - how to prep the sample matrix when multiple bam files are used by MAC
Comment: DiffBind: dba.plotProfile(profiles)
Normalisation of data using DESeq2 with multi-groups
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