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openprimer
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2
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9
replies
1.8k
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How to load fasta file with openPrimeR?
openPrimeR
written 3.2 years ago by
marongiu.luigi
• 0
0
votes
1
reply
341
views
How to save primers in a local file with openPrimeR
openPrimeR
updated 13 months ago by
Basti
▴ 780 • written 13 months ago by
Santiago Edilberto
• 0
0
votes
2
replies
712
views
How to save primers in local file in openPrimeR
openPrimeR
updated 13 months ago by
Santiago Edilberto
• 0 • written 3.1 years ago by
marongiu.luigi
• 0
0
votes
4
replies
593
views
Load templates from openPrimeR
PCRmultiplex
openPrimeR
14 months ago
Santiago Edilberto
• 0
0
votes
1
reply
622
views
openPrimer check_constraints cannot compute Tm
openPrimeR
updated 23 months ago by
matthias-doering
▴ 40 • written 23 months ago by
wnussbau
• 0
0
votes
1
reply
604
views
openPrimeR does not recognize external MELTING installation
openPrimeR
updated 2.7 years ago by
matthias-doering
▴ 40 • written 2.8 years ago by
benedikt.kirchner
• 0
0
votes
1
reply
573
views
How to increase the number of primer set output in openPrimeR
openPrimeR
updated 2.8 years ago by
matthias-doering
▴ 40 • written 3.1 years ago by
marongiu.luigi
• 0
1
vote
3
replies
1.1k
views
How to define settings for design primers with openPrimeR?
openPrimeR
3.2 years ago • updated 3.1 years ago
marongiu.luigi
• 0
0
votes
0
replies
656
views
openPrimeR can't find external dependencies
openPrimeRui
openPrimeR
4.9 years ago
Vinicius Henrique da Silva
▴ 40
9 results • Page
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Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You didn't generate it with an experiment, you made it up: Your PCA doesn't look like a good RNASeq experiment, because it's not.
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
swbarnes2
★ 1.3k
Your contrast is comparing LGR5 to Homeostasis. The bottom 2 are fine, it's the top one that is wrong. Are you sure this step isn't misla…
Comment: get BM error
by
James W. MacDonald
65k
I believe you need NCBI Gene IDs for KEGG, in which case you may need to map. The three genes you have shown here don't map, and of those t…
Comment: get BM error
by
Fara
• 0
Thank you for your response. The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
James W. MacDonald
65k
That's weird. I don't have any problem at all generating the `OrgDb` on my box. How big is the gene2pubmed.gz file? I get this: ``` gzip -…
Votes
Answer: get BM error
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
Comment: Different Shrunk Log2FC according with reference
Reproducibility issue with scran together with lapply and BiocParallel
C: SGSeq: moving toward diffex from SGSeq analysis
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