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Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.6k

ReportingTools has been fixed and a replacement maintainer found. It has also been undeprecated

Comment: rDGIdb package inconsistency with web interface by James W. MacDonald 64k

Yes. You went on the beta version and got different results than I (and the package) get when using the existing version. Was that not clea…

Comment: Downloading count matrix for full recount3 dataset by Nehir • 0

Hi, did you reach an agreement? Is it still not achievable?

Answer: WGCNA documentation not available by ATpoint ★ 3.6k

Documentation has been moved to a <sigh> Dropbox </sigh>... see https://bioinformatics.stackexchange.com/questions/21885/where-to-access-th…

Answer: Filter genes by expression for voomLmFit by Gordon Smyth 49k

There are several reasons why low-count genes are filtered: - The dispersion of low-counts genes is hard to estimate and misestimation may…

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Comment: Ensembl down???

Comment: Ensembl down???

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