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pRoloc
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Job:
Open position in the CBIO lab: spatial proteomics and PTMs
pRoloc
proteomics
Spatial
Proteomics
MassSpectrometry
13 months ago
Laurent Gatto
1.6k
0
votes
1
reply
690
views
pROLOC phenoDisco running extra interations, but not finishing cluster analysis
pRoloc
phenoDisco
updated 4.2 years ago by
Laurent Gatto
1.6k • written 4.3 years ago by
dave.g.rattray
• 0
1
vote
1
reply
977
views
pRoloc - phenoDisco - issue with example
pRoloc
phenoDisco
fcol
updated 4.7 years ago by
Laurent Gatto
1.6k • written 4.7 years ago by
johnscrn
• 0
1
vote
4
replies
1.4k
views
Problems with cholesky decomposition in pRoloc package
pRoloc
machine learning
cholesky
5.1 years ago
robinkretz
• 0
2
votes
6
replies
1.4k
views
Error in parameter setting using svmOptimisation for pRoloc analysis
bioconductor
proloc
updated 6.1 years ago by
Laurent Gatto
1.6k • written 6.1 years ago by
sjp221
• 0
0
votes
5
replies
1.5k
views
Trouble using addMarkers from pRoloc on my own dataset
proloc
proteomics
msnset
6.2 years ago
moldach
▴ 20
1
vote
4
replies
1.3k
views
Using Human Protein Atlas annotations with pRoloc to interpretate subcellular location
pRoloc
annotation
subcellular location
updated 6.2 years ago by
Laurent Gatto
1.6k • written 6.2 years ago by
moldach
▴ 20
7 results • Page
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Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Install/Switch between multiple versions of R, Rstudio, and Bioconductor
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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