Biostar Pacbio

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rnaseq data integration single-cell pacbio across species Job

3.4 years ago bgee • 0

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gviz bam pacbio

updated 5.2 years ago by florian.hahne@novartis.com ★ 1.6k • written 5.2 years ago by thackl • 0

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shortread pacbio fastq

updated 3.4 years ago by Martin Morgan 25k • written 3.4 years ago by benjamin.j.callahan ▴ 50

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pacbio pbi

3.2 years ago Frocha ▴ 10

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Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels by svlachavas ▴ 780

Dear Gordon, thank you very much for your valuable comment-probably James suggestion is the only way to include all the samples with `voomL…

Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels by svlachavas ▴ 780

Dear James, thank you for your additional clarification for the intended use of `voomLmFit`; Just to summarize three final points based o…

Answer: Getting paralogus genes from biomart for mouse by Mike Smith ★ 5.0k

First let's address why you're seeing the error. The reason you're getting the `Timeout was reached` error is because BioMart has a limit…

Comment: Getting paralogus genes from biomart for mouse by hemantcnaik • 0

@James W. MacDonald Thanks for the reply above one will give orthologus gene info I want "Paralog genes" within species

Comment: ChIPQC: Coverage plot by JACKSONFLEMING231 • 0

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Votes

Answer: Time series DE gene analysis with edgeR where specific timepoints have NA levels

Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels

tximeta error in fetching genome info

Answer: error in getBM (biomaRt): "error: no such table: metadata"

C: DESeq2 design formula: single control for multiple conditions [RIP-seq]

Awards • All

Popular Question to Thomas Maurel ▴ 790

Scholar to James W. MacDonald 57k

Teacher to Guido Hooiveld ★ 3.0k

Scholar to Michael Love 33k