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pathview
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pathview - a species in KEGG pathway but not in 'korg'
pathview
KEGG
Oryza_sativa
9 months ago
Jiyoung Lee
• 0
0
votes
3
replies
956
views
pathview error "negative length vectors are not allowed
pathview
kegg
KEGG
updated 5 months ago by
Benji Bromberg
▴ 20 • written 6 months ago by
Mauricio Diego
• 0
0
votes
1
reply
1.4k
views
Doubts regarding Pathview
Annotation
pathview
Annotation
pathview
written 9.7 years ago by
Luo Weijun
★ 1.6k
1
vote
1
reply
1.1k
views
Error with Pathview: Bad Request (HTTP 400)
KEGGREST
pathview
R
updated 11 months ago by
Guido Hooiveld
★ 3.9k • written 11 months ago by
morgan.sobol
• 0
0
votes
1
reply
139
views
Help with identifying genes mapped to KEGG pathway using pathview
pathview
updated 2 days ago by
Guido Hooiveld
★ 3.9k • written 10 days ago by
Julie
• 0
0
votes
0
replies
461
views
SSL connect error in e.g. pathview from R version 4 in Windows 10
pathview
SSL
curl
8 months ago
Matthias
• 0
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Comment: fgsea fork
by
shepherl
3.8k
For What its worth BiocManager should also be able to install the github remotes `BiocManager::install("ctlab/fgsea")`
Comment: fgsea fork
by
alserg
▴ 240
I'm also not sure what you mean by fork, but you also can install the latest version of fgsea directly from GitHub with `devtools::install_…
Comment: limma models out of memory issue on Slurm HPC
by
Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Comment: Doing comparison of RNA-seq data using EdgeR
by
Michael Love
41k
Just to clarify, when I originally posted the title and tags had listed "DESeq2" and then the post was changed after my answer was added. …
Comment: fgsea fork
by
shepherl
3.8k
Not quite sure what you mean by clone or fork the package on latest version of R. Bioconductor runs all builds on the latest version of R.…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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