Bioconductor PcaMethods

Showing : pcaMethods • reset

votes

replies

2.0k

views

OutlierD pcaMethods MicroarrayData Microarray

3.0 years ago waiyin0923 • 0

vote

replies

1.8k

views

pcamethods r

8.0 years ago stolarek.ir • 0

votes

replies

1.6k

views

impute pcaMethods impute pcaMethods

16.5 years ago De-Jian ZHAO ▴ 240

votes

replies

1.6k

views

pcaMethods pcaMethods

updated 15.4 years ago by Wolfgang Huber ★ 13k • written 15.4 years ago by Yury Bukhman ▴ 20

votes

replies

1.3k

views

aroma.light pcaMethods aroma.light pcaMethods

updated 15.5 years ago by Sean Davis 21k • written 15.5 years ago by Tillinghast, Guy, M.D. ▴ 30

votes

replies

1.3k

views

pcaMethods pcaMethods

10.1 years ago Julian Gehring ★ 1.3k

votes

replies

1.2k

views

pcamethods

updated 7.1 years ago by James W. MacDonald 65k • written 7.1 years ago by allantanaka11 • 0

votes

replies

1.1k

views

PCAtools pcaExplorer pcaMethods

updated 22 months ago by Federico Marini ▴ 150 • written 22 months ago by m610110001 • 0

votes

1.1k

views

metaboliteData pcaMethods pcamethods r package metabolite Data

updated 7.4 years ago by Valerie Obenchain ★ 6.8k • written 7.4 years ago by lukasz.galecki ▴ 10

votes

replies

1.1k

views

pcaMethods pcaMethods

13.2 years ago Manca Marco PATH ▴ 340

votes

replies

1.0k

views

pcaMethods pcaMethods

10.1 years ago Guest User ★ 13k

votes

replies

1.0k

views

pcaMethods pcaMethods

13.1 years ago Alfons Gonzalez ▴ 10

votes

replies

816

views

pcamethods missing data

7.0 years ago eli-sava • 0

votes

replies

800

views

Clustering pcaMethods Clustering pcaMethods

13.9 years ago avinash gupta ▴ 130

votes

746

views

pcamethods

updated 5.5 years ago by James W. MacDonald 65k • written 5.5 years ago by johnnytam100 • 0

votes

replies

559

views

pcaMethods

9 weeks ago yousavdj • 0

votes

replies

550

views

pcaMethods

3.2 years ago k.vitting.seerup ▴ 120

votes

replies

532

views

pcaMethods

3.0 years ago Gero • 0

votes

replies

313

views

pcaMethods pca

updated 9 weeks ago by James W. MacDonald 65k • written 9 weeks ago by yousavdj • 0

19 results • Page 1 of 1

Recent ...

Replies

Comment: DESeq2 setting significant p-value by Michael Love 41k

It does not resort. Also the dataset and results will have the same row names from object creation throughout the analysis.

Comment: Input Question for deseq.r by ATpoint ★ 4.0k

It is unclear what "deseq.r" is. It is not part of DESeq2, and almost certainly no part of RSeqAn. Please add details, and keep in mind tha…

Answer: DESEQ2 output gives multiple groups when only 2 groups are present by ATpoint ★ 4.0k

In the first PCA plot there is almost certainly some hidden character like whitespaces in the column from colData that encodes this group. …

Answer: A ComBat-seq issue: the covariates are confounded by ATpoint ★ 4.0k

```r > table(batch, group) group batch egfr gfp her2 1 0 12 5 2 6 6 0 ``` All of her2 is batch2, all of egfr i…

Comment: DESeq2 setting significant p-value by Dev • 0

after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …

Votes

Using GRanges and IRanges to simply get all chromosome data

A: Using GRanges and IRanges to simply get all chromosome data

Comment: Reading huge bismark coverage files using bbseq::read.bismark

Answer: Reading huge bismark coverage files using bbseq::read.bismark

Awards • All