Bioconductor Pcatools

Showing : pcatools • reset

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2.0k

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ellipse RNAseq PCAtools

updated 9 weeks ago by Paola • 0 • written 2.0 years ago by elizabethe819 • 0

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410

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Biplot FactoMineR proteomics PCAtools ellipse

updated 4 months ago by Kevin Blighe 3.8k • written 4 months ago by M Tuhin • 0

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315

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illumina PCAtools PCA

updated 6 months ago by Kevin Blighe 3.8k • written 6 months ago by ilaria.debenedictis • 0

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495

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PCAtools bioconductor

updated 10 months ago by James W. MacDonald 63k • written 10 months ago by pterry • 0

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495

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PCAtools pcaExplorer pcaMethods

updated 11 months ago by Federico Marini ▴ 150 • written 11 months ago by m610110001 • 0

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1.2k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

13 months ago Alan • 0

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516

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PCAtools

2.2 years ago luca.s ▴ 40

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1.8k

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PCAtools

updated 2.4 years ago by Kevin Blighe 3.8k • written 2.4 years ago by Terra • 0

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2.3k

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biplot PCA RNASeq PCAtools

updated 2.5 years ago by Kevin Blighe 3.8k • written 2.5 years ago by mschmidt ▴ 10

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1.1k

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PCAtools biplot DESeq2 RNASeq PCA

updated 2.5 years ago by Kevin Blighe 3.8k • written 2.5 years ago by ecg1g15 ▴ 20

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939

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PCATools

updated 2.6 years ago by Kevin Blighe 3.8k • written 2.6 years ago by oakhamwolf • 0

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1.1k

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EDA pcaExplorer PCAtools PCA

updated 17 months ago by Miguel ▴ 10 • written 2.8 years ago by k.vitting.seerup ▴ 120

12 results • Page 1 of 1

Recent ...

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Answer: multiple filters in biomaRt by RuBBiT0 ▴ 10

First, yes, one gene could be related to several GO ID, and the result is based on the annotation package you use. Second, could you pro…

Comment: Diffbind "No genome detected" by kyliecode • 0

Hi Dr. Stark, Thanks very much for your reply! The bam files were output from nf-core/chipseq pipeline and for some reason, they do not ha…

Answer: Discrepancy between DESeq2 files produced in Galaxy and R(RStudio) by Michael Love 40k

I guess that Galaxy may be using some kind of LFC shrinkage, but without seeing their code I wouldn't know for sure. Shrinkage generally…

Comment: TCGAbiolinks cannot find bcr_patient_barcode by Habil Zare ▴ 170

I checked your example with the devel version 2.29.6 on Bioc and it worked fine. Thanks for the fix!

Answer: error in ChAMP loading file by jenniferbrowngates • 0

I got a lot of information from this website about different topics which is beneficial for me too so I thank this site and also suggest a …

Votes

Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)

Comment: Error: biomaRt has encountered an unexpected server error.

Comment: Interpret plot from DiffBind

Awards • All

Scholar to Tiago C. Silva ▴ 270