Biostar Pd.hta.2.0

Showing : pd.hta.2.0 • reset

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1.4k

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hta20sttranscriptcluster.db probe mapping annotation pd.hta.2.0 annotationdbi

updated 5.4 years ago by James W. MacDonald 58k • written 5.4 years ago by relathman ▴ 20

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1.4k

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pd.hta.2.0 ggh3 oligo glue grant

updated 6.1 years ago by James W. MacDonald 58k • written 6.1 years ago by Robert Castelo ★ 2.8k

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3.8k

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pd.hta.2.0

updated 5.2 years ago by James W. MacDonald 58k • written 5.2 years ago by pbachali ▴ 20

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922

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hta pd.hta.2.0 hta20sttranscriptcluster.db

updated 5.5 years ago by James W. MacDonald 58k • written 5.5 years ago by giroudpaul ▴ 40

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1.8k

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affymetrix microarrays microarray pd.hta.2.0 oligo rma

updated 5.9 years ago by James W. MacDonald 58k • written 5.9 years ago by jennifer.drake • 0

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1.5k

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software error annotation genefilter pd.hta.2.0

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by Lian Liu ▴ 20

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1.6k

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pd.hta.2.0 R

5.5 years ago • updated 4.9 years ago s.munster ▴ 40

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988

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pd.hta.2.0 hta2.0 affycoretools

updated 4.4 years ago by James W. MacDonald 58k • written 4.4 years ago by relathman ▴ 20

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1.7k

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oligo pdInfoBuilder pd.hta.2.0

6.5 years ago tangboyun ▴ 30

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1.1k

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package installation pd.hta.2.0

4.4 years ago alexander2073 • 0

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1.0k

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oligo pd.hta.2.0 CEL R windows 7

4.4 years ago ladhikari • 0

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1.1k

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pd.hta.2.0 transcript differential gene expression

updated 6.2 years ago by James W. MacDonald 58k • written 6.2 years ago by jacorvar ▴ 40

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661

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oligo rsqlite pd.hta.2.0

updated 5.4 years ago by James W. MacDonald 58k • written 5.4 years ago by Vincent J. Carey, Jr. 6.6k

13 results • Page 1 of 1

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Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by swbarnes2 ▴ 970

You can have as many columns as you like in coldata, only those specified in the design will be used when you do the DESeq command So sur…

Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by Matthew • 0

Thanks for the suggestion, I'll give that a try! Based on the PCA, all three factors do tend to influence the results, so I'll try the colu…

Comment: fgsea not downloading due to new r version. Is there a way around this? by amir.khan • 0

Seems to have done the trick and worked. thanks!

Comment: Multi-factor paired RNAseq differential analysis with DEseq2 by Michael Love 35k

Just to underscore swbarnes2 advice above, I'd also recommend discussing statistical design with a local statistician or someone familiar w…

Answer: Multi-factor paired RNAseq differential analysis with DEseq2 by swbarnes2 ▴ 970

First, I'd start by looking at all your samples in PCA. Does sex have a strong effect? Does it make sense to compare one tissue with anot…

Votes

Answer: fgsea not downloading due to new r version. Is there a way around this?

Comment: Unable to install Rhtslib in R-4.1.1

Answer: fgsea not downloading due to new r version. Is there a way around this?

Answer: Swish with more than two conditions. Add support for contrasts?

Answer: ERROR: unable to find an inherited method for function ‘dispersions<-’ for signa

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