Bioconductor Peakset

Showing : peakset • reset

votes

replies

6.8k

views

peakset diffbind

updated 7.4 years ago by Gord Brown ▴ 650 • written 7.4 years ago by wesley.cai • 0

votes

replies

1.5k

views

r bioinformatics peakset

updated 12 months ago by montuorikandi1759 • 0 • written 8.3 years ago by Jurat Shahidin ▴ 80

vote

replies

1.3k

views

diffbind peakset

updated 8.3 years ago by Gord Brown ▴ 650 • written 8.3 years ago by eli7javasky • 0

votes

replies

831

views

motifs TF peakset plots

7.1 years ago rbronste ▴ 60

votes

replies

565

views

DiffBind Peakset

updated 4.1 years ago by Rory Stark ★ 5.1k • written 4.1 years ago by hkitano • 0

5 results • Page 1 of 1

Recent ...

Replies

Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Votes

Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Awards • All

Popular Question to James W. MacDonald 65k