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pfam go.db kegg.db

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by josefina.lascanomaillard • 0

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pfam

updated 6.2 years ago by James W. MacDonald 63k • written 6.2 years ago by c • 0

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PFAM Category GOstats

updated 8.4 years ago by Guangchuang Yu ★ 1.2k • written 8.4 years ago by Iain Gallagher ▴ 930

3 results • Page 1 of 1

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Answer: Is SeqSQC compatible with hg38? by James W. MacDonald 63k

I'll answer your question with a question. Is there any reason to believe that things like IBD or PCA or Sex checks would be dependent on t…

Comment: using featureCounts (Subread) to count only spliced reads per gene - behavior of by Gregory • 0

Thanks for the prompt response, Gordon. I'm looking for count at the gene level - the gene id is the meta feature, so one row per gene in …

Comment: DiffBind handling of replicates and consensus by Rory Stark ★ 5.0k

You may want to try different values for the `normalize` parameter: dbObj <- dba.normalize(DBA = dbObj, library = "RiP", normalize=DBA…

Comment: DiffBind: dba.plotProfile(profiles) by Rory Stark ★ 5.0k

Yes, setting `raster_quality` down is a good way to address this issue. I've taken to using `raster_quality=1` in general as I think the pl…

Comment: DiffBind: dba.plotProfile(profiles) by Dorien ▴ 10

Not really an answer as I don't know really know why , but I also had the same issue and may have found a workaround ! If I set maxSites > …

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Answer: How do I merge a list of GRanges?

Comment: DiffBind: dba.plotProfile(profiles)

Comment: DiffBind: dba.plotProfile(profiles)

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